HIV Target gene Detail Information

> R3HDM1 Gene Search Result

Gene Information

Gene Name	R3HDM1
Gene ID	23518
Gene Full Name	R3H domain containing 1
Gene Alias	R3HDM
Transcripts	ENSG00000048991
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q15032
HGNC ID	HGNC:9757
VEGA ID	OTTHUMG00000131740
String ID	9606.ENSP00000387010
PharmGKB ID	PA34098

Target gene [R3HDM1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000745	chr2	63	55	176	294	View
4012950	chr2	2	2		4	View
4013897	chr2	2	1		3	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of R3HDM1 expression and immune infiltrating cell level correlation result in HIV+ samples
R3HDM1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of R3HDM1 expression and immune infiltrating cell level correlation result in HIV+ samples
R3HDM1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).