HIV Target gene Detail Information

> R3HCC1L Gene Search Result

Gene Information

Gene Name	R3HCC1L
Gene ID	27291
Gene Full Name	R3H domain and coiled-coil containing 1 like
Gene Alias	PSORT; GIDRP86; GIDRP88; C10orf28
Transcripts	ENSG00000166024
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear speckles;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q7Z5L2
HGNC ID	HGNC:23512
VEGA ID	OTTHUMG00000018873
String ID	9606.ENSP00000483494
PharmGKB ID	PA134939071

Target gene [R3HCC1L] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4014592	chr10	1	1		2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of R3HCC1L expression and immune infiltrating cell level correlation result in HIV+ samples
R3HCC1L expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).