HTLV1 Target gene Detail Information

> PTPRT Gene Search Result

Gene Information

Gene Name	PTPRT
Gene ID	11122
Gene Full Name	protein tyrosine phosphatase, receptor type T
Gene Alias	RPTPrho
Transcripts	ENSG00000196090
Virus	HTLV1
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Cancer-related genes, Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Gene Function	Suppressor gene
Uniport_ID	O14522
HGNC ID	HGNC:9682
VEGA ID	OTTHUMG00000033040
OMIM ID	608712
String ID	9606.ENSP00000362294
PharmGKB ID	PA34027

Target gene [PTPRT] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6007703	chr20	22	30		52	View
6017864	chr20	7	3		10	View
6019399	chr20	1	6	1	8	View
6020485	chr20	6		1	7	View
6022129	chr20		5		5	View
6023315	chr20	3	1		4	View
6027237	chr20	1	1		2	View
6027917	chr20	1			1	View
6030931	chr20				0	View
6031494	chr20				0	View
6032867	chr20				0	View
6033549	chr20				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).