HPV Target gene Detail Information

> PTPRT Gene Search Result

Gene Information

Gene Name	PTPRT
Gene ID	11122
Gene Full Name	protein tyrosine phosphatase, receptor type T
Gene Alias	RPTPrho
Transcripts	ENSG00000196090
Virus	HPV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Cancer-related genes, Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Gene Function	Suppressor gene
Uniport_ID	O14522
HGNC ID	HGNC:9682
VEGA ID	OTTHUMG00000033040
OMIM ID	608712
String ID	9606.ENSP00000362294
PharmGKB ID	PA34027

Target gene [PTPRT] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5000170	chr20	597	536	150	1283	View
5200104	chr20				0	View
5200509	chr20	30	9		39	View
5200619	chr20	38			38	View
5201002	chr20	3			3	View
5402777	chr20	1	1		2	View
5403190	chr20	111	2		113	View
5404971	chr20		3		3	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).