HIV Target gene Detail Information

> PTBP3 Gene Search Result

Gene Information

Gene Name	PTBP3
Gene ID	9991
Gene Full Name	polypyrimidine tract binding protein 3
Gene Alias	ROD1
Transcripts	ENSG00000119314
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	O95758
HGNC ID	HGNC:10253
VEGA ID	OTTHUMG00000020503
OMIM ID	607527
String ID	9606.ENSP00000414921
PharmGKB ID	PA34625

Target gene [PTBP3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000675	chr9	262	50	12	324	View
4007702	chr9	13	5		18	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of PTBP3 expression and immune infiltrating cell level correlation result in HIV+ samples
PTBP3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).