EBV Target gene Detail Information

> PSMG3-AS1 Gene Search Result

Gene Information

Gene Name	PSMG3-AS1
Gene ID	114796
Transcripts	ENSG00000230487
Virus	EBV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:22230
lncRNASNP2 ID	NONHSAG046774.2

Target gene [PSMG3-AS1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
3000364	chr7	11	17		28	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE102203 (GEO)	B-cell lymphoma	9	Plasmablastic lymphomas (EBV+)(6), Plasmablastic lymphomas (EBV-)(3)
GSE42867 (GEO)	Burkitt lymphoma	12	Burkitt lymphoma cell line Awia (EBV+)(12)
GSE85599 (GEO)	Infectious mononucleosis	17	Chronic active EBV infection (EBV+)(5), Acute infectious mononucleosis (EBV+)(6), Normal (6)
GSE12452 (GEO)	Nasopharyngeal carcinoma	41	Nasopharyngeal carcinoma (EBV+)(31), Normal(10)

> Dataset: GSE102203
HeatMap of cell type fractions in all samples	Lollipop of PSMG3-AS1 expression and immune infiltrating cell level correlation result in EBV+ samples
PSMG3-AS1 expression: Low -> High

> Dataset: GSE42867
HeatMap of cell type fractions in all samples	Lollipop of PSMG3-AS1 expression and immune infiltrating cell level correlation result in EBV+ samples
PSMG3-AS1 expression: Low -> High

> Dataset: GSE85599
HeatMap of cell type fractions in all samples	Lollipop of PSMG3-AS1 expression and immune infiltrating cell level correlation result in EBV+ samples
PSMG3-AS1 expression: Low -> High

> Dataset: GSE12452
HeatMap of cell type fractions in all samples	Lollipop of PSMG3-AS1 expression and immune infiltrating cell level correlation result in EBV+ samples
PSMG3-AS1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).