HBV Target gene Detail Information

> PSMG2 Gene Search Result


Gene Information
Gene Name PSMG2
Gene ID 56984
Gene Full Name proteasome assembly chaperone 2
Gene Alias PAC2; HCCA3; CLAST3; MDS003; HsT1707; TNFSF5IP1
Transcripts ENSG00000128789
Virus HBV
Gene Type protein coding
HPA Location Info Nuclear bodies;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q969U7
HGNC ID HGNC:24929
VEGA ID OTTHUMG00000131703
OMIM ID 609702
String ID 9606.ENSP00000325919
PharmGKB ID PA162400246
Target gene [PSMG2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1007971 chr18 23 23 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PSMG2 expression and immune infiltrating cell level correlation result in HBV+ samples
PSMG2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).