HIV Target gene Detail Information

> PSMD9 Gene Search Result

Gene Information

Gene Name	PSMD9
Gene ID	5715
Gene Full Name	proteasome 26S subunit, non-ATPase 9
Gene Alias	p27; Rpn4
Transcripts	ENSG00000110801
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Plasma membrane;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	O00233
HGNC ID	HGNC:9567
VEGA ID	OTTHUMG00000168945
OMIM ID	603146
String ID	9606.ENSP00000440485
PharmGKB ID	PA33913

Target gene [PSMD9] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001016	chr12	165	37	26	228	View
4011696	chr12	5	1		6	View
4015256	chr12	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of PSMD9 expression and immune infiltrating cell level correlation result in HIV+ samples
PSMD9 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of PSMD9 expression and immune infiltrating cell level correlation result in HIV+ samples
PSMD9 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).