HBV Target gene Detail Information

> PSAP Gene Search Result


Gene Information
Gene Name PSAP
Gene ID 5660
Gene Full Name prosaposin
Gene Alias GLBA; SAP1
Transcripts ENSG00000197746
Virus HBV
Gene Type protein coding
HPA Location Info Vesicles;
HPA Protein Class Info Disease related genes, Plasma proteins, Potential drug targets, Predicted intracellular proteins, Transporters
Uniport_ID P07602
HGNC ID HGNC:9498
VEGA ID OTTHUMG00000018429
OMIM ID 176801
String ID 9606.ENSP00000378394
Drugbank ID BE0001175
PharmGKB ID PA33845
Target gene [PSAP] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005915 chr10 15 21 10 46 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of PSAP expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
PSAP expression: Low -> High
Lollipop of PSAP expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of PSAP expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PSAP expression and immune infiltrating cell level correlation result in HBV+ samples
PSAP expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).