HBV Target gene Detail Information

> PRUNE2 Gene Search Result


Gene Information
Gene Name PRUNE2
Gene ID 158471
Gene Full Name prune homolog 2
Gene Alias BMCC1; BNIPXL; C9orf65; KIAA0367
Transcripts ENSG00000106772
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q8WUY3
HGNC ID HGNC:25209
VEGA ID OTTHUMG00000020047
OMIM ID 610691
String ID 9606.ENSP00000365908
PharmGKB ID PA162400198
Target gene [PRUNE2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005332 chr9 7 47 2 56 View
1400123 chr9 1472 143 47 1662 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PRUNE2 expression and immune infiltrating cell level correlation result in HBV+ samples
PRUNE2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).