HBV Target gene Detail Information

> PRR16 Gene Search Result


Gene Information
Gene Name PRR16
Gene ID 51334
Gene Full Name proline rich 16
Gene Alias DSC54; LARGEN
Transcripts ENSG00000184838
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;Midbody;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q569H4
HGNC ID HGNC:29654
VEGA ID OTTHUMG00000128903
OMIM ID 615931
String ID 9606.ENSP00000385118
PharmGKB ID PA162400155
Target gene [PRR16] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1015042 chr5 3 3 View
1100053 chr5 0 View
1100055 chr5 0 View
1100057 chr5 0 View
1100059 chr5 0 View
1100061 chr5 0 View
1100063 chr5 0 View
1100065 chr5 0 View
1100067 chr5 0 View
1100069 chr5 0 View
1100071 chr5 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PRR16 expression and immune infiltrating cell level correlation result in HBV+ samples
PRR16 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).