HIV Target gene Detail Information

> PRPF6 Gene Search Result

Gene Information

Gene Name	PRPF6
Gene ID	24148
Gene Full Name	pre-mRNA processing factor 6
Gene Alias	TOM; ANT1; Prp6; RP60; ANT-1; hPrp6; U5-102K; C20orf14; SNRNP102
Transcripts	ENSG00000101161
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear speckles;
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	O94906
HGNC ID	HGNC:15860
VEGA ID	OTTHUMG00000033018
OMIM ID	613979
String ID	9606.ENSP00000266079
PharmGKB ID	PA25682

Target gene [PRPF6] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000701	chr20	185	41	86	312	View
4001533	chr20	149	4		153	View
4001552	chr20	105	29	17	151	View
4001718	chr20	128	1	8	137	View
4004643	chr20	38	3		41	View
4005441	chr20	32			32	View
4006647	chr20	18	5		23	View
4007519	chr20	17	2		19	View
4009343	chr20	12			12	View
4010314	chr20	9			9	View
4010472	chr20	7	2		9	View
4010587	chr20	5	3		8	View
4010869	chr20	6	2		8	View
4011087	chr20	6	1		7	View
4011655	chr20	5	1		6	View
4013476	chr20	2	1		3	View
4013529	chr20	2	1		3	View
4014437	chr20	2			2	View
4300101	chr20	14	1		15	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).