HIV Target gene Detail Information

> PRPF39 Gene Search Result


Gene Information
Gene Name PRPF39
Gene ID 55015
Gene Full Name pre-mRNA processing factor 39
Transcripts ENSG00000185246
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q86UA1
HGNC ID HGNC:20314
VEGA ID OTTHUMG00000140265
OMIM ID 614907
String ID 9606.ENSP00000348010
PharmGKB ID PA142671127
Target gene [PRPF39] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000517 chr14 41 101 265 407 View
4003631 chr14 45 12 57 View
4013153 chr14 4 4 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).