HIV Target gene Detail Information

> PRMT2 Gene Search Result


Gene Information
Gene Name PRMT2
Gene ID 3275
Gene Full Name protein arginine methyltransferase 2
Gene Alias HRMT1L1
Transcripts ENSG00000160310
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID P55345
HGNC ID HGNC:5186
VEGA ID OTTHUMG00000048806
OMIM ID 601961
String ID 9606.ENSP00000380759
PharmGKB ID PA29460
Target gene [PRMT2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4009568 chr21 11 11 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of PRMT2 expression and immune infiltrating cell level correlation result in HIV+ samples
PRMT2 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of PRMT2 expression and immune infiltrating cell level correlation result in HIV+ samples
PRMT2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).