HTLV1 Target gene Detail Information

> PRKN Gene Search Result

Gene Information

Gene Name	PRKN
Gene ID	5071
Gene Full Name	parkin RBR E3 ubiquitin protein ligase
Gene Alias	PDJ; AR-JP; LPRS2; PARK2
Transcripts	ENSG00000185345
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Nuclear speckles;Cytosol;
HPA Protein Class Info	Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins
Gene Function	Suppressor gene
Uniport_ID	O60260
HGNC ID	HGNC:8607
OMIM ID	602544
PharmGKB ID	PA32942

Target gene [PRKN] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6013601	chr6	5	13	1	19	View
6013604	chr6	7	12		19	View
6015962	chr6	12	1		13	View
6018888	chr6	7	1		8	View
6020066	chr6	7			7	View
6027314	chr6	2			2	View
6029141	chr6		1		1	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).