HBV Target gene Detail Information

> PRKCG Gene Search Result


Gene Information
Gene Name PRKCG
Gene ID 5582
Gene Full Name protein kinase C gamma
Gene Alias PKCC; PKCG; SCA14; PKCI(3); PKCgamma; PKC-gamma
Transcripts ENSG00000126583
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins, RAS pathway related proteins
Uniport_ID P05129
HGNC ID HGNC:9402
VEGA ID OTTHUMG00000064846
OMIM ID 176980
String ID 9606.ENSP00000263431
Drugbank ID BE0004830; BE0009588; BE0004895
PharmGKB ID PA33766
Target gene [PRKCG] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1009494 chr19 15 15 View
1403392 chr19 15 15 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PRKCG expression and immune infiltrating cell level correlation result in HBV+ samples
PRKCG expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).