HIV Target gene Detail Information

> PRKAG1 Gene Search Result

Gene Information

Gene Name	PRKAG1
Gene ID	5571
Gene Full Name	protein kinase AMP-activated non-catalytic subunit gamma 1
Gene Alias	AMPKG
Transcripts	ENSG00000181929
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	P54619
HGNC ID	HGNC:9385
VEGA ID	OTTHUMG00000170406
OMIM ID	602742
String ID	9606.ENSP00000323867
Drugbank ID	BE0004844; BE0004907
PharmGKB ID	PA33751

Target gene [PRKAG1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4008138	chr12	16			16	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of PRKAG1 expression and immune infiltrating cell level correlation result in HIV+ samples
PRKAG1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of PRKAG1 expression and immune infiltrating cell level correlation result in HIV+ samples
PRKAG1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).