HIV Target gene Detail Information

> PPP4R2 Gene Search Result


Gene Information
Gene Name PPP4R2
Gene ID 151987
Gene Full Name protein phosphatase 4 regulatory subunit 2
Gene Alias PP4R2
Transcripts ENSG00000163605
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9NY27
HGNC ID HGNC:18296
VEGA ID OTTHUMG00000158816
OMIM ID 613822
String ID 9606.ENSP00000349124
PharmGKB ID PA38520
Target gene [PPP4R2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4015113 chr3 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of PPP4R2 expression and immune infiltrating cell level correlation result in HIV+ samples
PPP4R2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).