HIV Target gene Detail Information

> PPP2R5E Gene Search Result


Gene Information
Gene Name PPP2R5E
Gene ID 5529
Gene Full Name protein phosphatase 2 regulatory subunit B'epsilon
Gene Alias B56E; B56epsilon
Transcripts ENSG00000154001
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q16537
HGNC ID HGNC:9313
VEGA ID OTTHUMG00000140341
OMIM ID 601647
String ID 9606.ENSP00000337641
PharmGKB ID PA33677
Target gene [PPP2R5E] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000552 chr14 287 58 30 375 View
4004276 chr14 14 32 46 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of PPP2R5E expression and immune infiltrating cell level correlation result in HIV+ samples
PPP2R5E expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of PPP2R5E expression and immune infiltrating cell level correlation result in HIV+ samples
PPP2R5E expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).