HBV Target gene Detail Information

> PPP1R9A Gene Search Result


Gene Information
Gene Name PPP1R9A
Gene ID 55607
Gene Full Name protein phosphatase 1 regulatory subunit 9A
Gene Alias NRB1; NRBI; Neurabin-I
Transcripts ENSG00000158528
Virus HBV
Gene Type protein coding
HPA Location Info Plasma membrane;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q9ULJ8
HGNC ID HGNC:14946
VEGA ID OTTHUMG00000155566
OMIM ID 602468
String ID 9606.ENSP00000405514
PharmGKB ID PA33661
Target gene [PPP1R9A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008775 chr7 18 1 19 View
1015649 chr7 2 2 View
1015650 chr7 2 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PPP1R9A expression and immune infiltrating cell level correlation result in HBV+ samples
PPP1R9A expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).