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EBV Target gene Detail Information

> PPP1R16B Gene Search Result


Gene Information
Gene Name PPP1R16B
Gene ID 26051
Gene Full Name protein phosphatase 1 regulatory subunit 16B
Gene Alias TIMAP; ANKRD4
Transcripts ENSG00000101445
Virus EBV
Gene Type protein coding
HPA Location Info Plasma membrane;Nuclear speckles;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q96T49
HGNC ID HGNC:15850
VEGA ID OTTHUMG00000032465
OMIM ID 613275
String ID 9606.ENSP00000299824
PharmGKB ID PA33635
Target gene [PPP1R16B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000363 chr20 16 12 28 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE102203 (GEO) B-cell lymphoma 9 Plasmablastic lymphomas (EBV+)(6), Plasmablastic lymphomas (EBV-)(3)
GSE100458 (GEO) Burkitt lymphoma 14 Burkitt lyphoma cell line Akata(EBV+)(2),Burkitt lyphoma cell line Akata(EBV-)(2),Burkitt lyphoma cell line Awia(EBV+)(2),Burkitt lyphoma cell line Awia(EBV-)(2),Burkitt lyphoma cell line Eli(EBV+)(1),Burkitt lyphoma cell line Eli(EBV-)(1),Burkitt lyphoma cell line Mutu(EBV+)(2),Burkitt lyphoma cell line Mutu(EBV-)(2)
GSE42867 (GEO) Burkitt lymphoma 12 Burkitt lymphoma cell line Awia (EBV+)(12)
GSE135644 (GEO) Gastric carcinoma 10 Gastric adenocarcinoma cell line AGS (5), Gastric adenocarcinoma cell line AGS (EBV+)(5)
GSE45919 (GEO) Infectious mononucleosis 24 Infectious mononucleosis (IM)(EBV+)(3), Normal (9), Latent EBV (12)
GSE85599 (GEO) Infectious mononucleosis 17 Chronic active EBV infection (EBV+)(5), Acute infectious mononucleosis (EBV+)(6), Normal (6)
GSE58240 (GEO) Multiple sclerosis 32 Multiple sclerosis IFN-β treated (EBV+)(16), Multiple sclerosis untreated (EBV+)(16)
GSE12452 (GEO) Nasopharyngeal carcinoma 41 Nasopharyngeal carcinoma (EBV+)(31), Normal(10)

> Dataset: GSE102203

HeatMap of cell type fractions in all samples Lollipop of PPP1R16B expression and immune infiltrating cell level correlation result in EBV+ samples
PPP1R16B expression: Low -> High

> Dataset: GSE100458

HeatMap of cell type fractions in all samples Lollipop of PPP1R16B expression and immune infiltrating cell level correlation result in EBV+ samples
PPP1R16B expression: Low -> High

> Dataset: GSE42867

HeatMap of cell type fractions in all samples Lollipop of PPP1R16B expression and immune infiltrating cell level correlation result in EBV+ samples
PPP1R16B expression: Low -> High

> Dataset: GSE135644

HeatMap of cell type fractions in all samples Lollipop of PPP1R16B expression and immune infiltrating cell level correlation result in EBV+ samples
PPP1R16B expression: Low -> High

> Dataset: GSE45919

HeatMap of cell type fractions in all samples Lollipop of PPP1R16B expression and immune infiltrating cell level correlation result in EBV+ samples
PPP1R16B expression: Low -> High

> Dataset: GSE85599

HeatMap of cell type fractions in all samples Lollipop of PPP1R16B expression and immune infiltrating cell level correlation result in EBV+ samples
PPP1R16B expression: Low -> High

> Dataset: GSE58240

HeatMap of cell type fractions in all samples Lollipop of PPP1R16B expression and immune infiltrating cell level correlation result in EBV+ samples
PPP1R16B expression: Low -> High

> Dataset: GSE12452

HeatMap of cell type fractions in all samples Lollipop of PPP1R16B expression and immune infiltrating cell level correlation result in EBV+ samples
PPP1R16B expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).