HBV Target gene Detail Information

> PPM1H Gene Search Result


Gene Information
Gene Name PPM1H
Gene ID 57460
Gene Full Name protein phosphatase, Mg2+/Mn2+ dependent 1H
Gene Alias URCC2; ARHCL1; NERPP-2C
Transcripts ENSG00000111110
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q9ULR3
HGNC ID HGNC:18583
VEGA ID OTTHUMG00000169990
OMIM ID 616016
String ID 9606.ENSP00000228705
PharmGKB ID PA38354
Target gene [PPM1H] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1010817 chr12 5 5 1 11 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PPM1H expression and immune infiltrating cell level correlation result in HBV+ samples
PPM1H expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).