HBV Target gene Detail Information

> PPFIA2 Gene Search Result


Gene Information
Gene Name PPFIA2
Gene ID 8499
Gene Full Name PTPRF interacting protein alpha 2
Transcripts ENSG00000139220
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID O75334
HGNC ID HGNC:9246
VEGA ID OTTHUMG00000170181
OMIM ID 603143
String ID 9606.ENSP00000450337
PharmGKB ID PA33567
Target gene [PPFIA2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001970 chr12 30 283 79 392 View
1007078 chr12 14 17 31 View
1007140 chr12 2 6 22 30 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PPFIA2 expression and immune infiltrating cell level correlation result in HBV+ samples
PPFIA2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).