HBV Target gene Detail Information

> POTEC Gene Search Result


Gene Information
Gene Name POTEC
Gene ID 388468
Gene Full Name POTE ankyrin domain family member C
Gene Alias A26B2; POTE18; CT104.6; POTE-18
Transcripts ENSG00000183206
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID B2RU33
HGNC ID HGNC:33894
VEGA ID OTTHUMG00000162963
String ID 9606.ENSP00000351856
PharmGKB ID PA164724729
Target gene [POTEC] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1007965 chr18 20 3 23 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of POTEC expression and immune infiltrating cell level correlation result in HBV+ samples
POTEC expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).