HIV Target gene Detail Information

> POM121C Gene Search Result

Gene Information

Gene Name	POM121C
Gene ID	100101267
Gene Full Name	POM121 transmembrane nucleoporin C
Gene Alias	POM121-2
Transcripts	ENSG00000272391
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear membrane;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
HGNC ID	HGNC:34005
VEGA ID	OTTHUMG00000156238
OMIM ID	615754
String ID	9606.ENSP00000481575
PharmGKB ID	PA162399935

Target gene [POM121C] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4007985	chr7	15	2		17	View
4010447	chr7	8		1	9	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of POM121C expression and immune infiltrating cell level correlation result in HIV+ samples
POM121C expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of POM121C expression and immune infiltrating cell level correlation result in HIV+ samples
POM121C expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).