HIV Target gene Detail Information

> POLR2A Gene Search Result


Gene Information
Gene Name POLR2A
Gene ID 5430
Gene Full Name RNA polymerase II subunit A
Gene Alias RPB1; RPO2; POLR2; POLRA; RPBh1; RPOL2; RpIILS; hsRPB1; hRPB220
Transcripts ENSG00000284832
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID P24928
HGNC ID HGNC:9187
VEGA ID OTTHUMG00000177594
OMIM ID 180660
String ID 9606.ENSP00000480158
PharmGKB ID PA33507
Target gene [POLR2A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000433 chr17 218 246 2 466 View
4001491 chr17 20 138 158 View
4005064 chr17 4 32 36 View
4005604 chr17 20 11 31 View
4005825 chr17 4 25 29 View
4006411 chr17 25 25 View
4009498 chr17 11 11 View
4009736 chr17 11 11 View
4010565 chr17 5 3 8 View
4010957 chr17 6 1 1 8 View
4011062 chr17 6 1 7 View
4012250 chr17 4 1 5 View
4013443 chr17 2 1 3 View
4013622 chr17 1 2 3 View
4013623 chr17 2 1 3 View
4015173 chr17 1 1 View
4015980 chr17 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).