HIV Target gene Detail Information

> POGZ Gene Search Result


Gene Information
Gene Name POGZ
Gene ID 23126
Gene Full Name pogo transposable element derived with ZNF domain
Gene Alias MRD37; WHSUS; ZNF635; ZNF280E; ZNF635m
Transcripts ENSG00000143442
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID Q7Z3K3
HGNC ID HGNC:18801
VEGA ID OTTHUMG00000012499
OMIM ID 614787
String ID 9606.ENSP00000271715
PharmGKB ID PA38685
Target gene [POGZ] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4004322 chr1 34 11 1 46 View
4009719 chr1 10 1 11 View
4009720 chr1 10 1 11 View
4009721 chr1 10 1 11 View
4009722 chr1 10 1 11 View
4009723 chr1 10 1 11 View
4011546 chr1 4 2 6 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of POGZ expression and immune infiltrating cell level correlation result in HIV+ samples
POGZ expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of POGZ expression and immune infiltrating cell level correlation result in HIV+ samples
POGZ expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).