HBV Target gene Detail Information

> PLEKHA6 Gene Search Result


Gene Information
Gene Name PLEKHA6
Gene ID 22874
Gene Full Name pleckstrin homology domain containing A6
Gene Alias PEPP3; PEPP-3
Transcripts ENSG00000143850
Virus HBV
Gene Type protein coding
HPA Location Info Cell Junctions;Vesicles;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9Y2H5
HGNC ID HGNC:17053
VEGA ID OTTHUMG00000036057
OMIM ID 607771
String ID 9606.ENSP00000272203
PharmGKB ID PA134955964
Target gene [PLEKHA6] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001669 chr1 151 205 179 535 View
1002530 chr1 240 7 8 255 View
1400112 chr1 3 3 6 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PLEKHA6 expression and immune infiltrating cell level correlation result in HBV+ samples
PLEKHA6 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).