HBV Target gene Detail Information

> PIGU Gene Search Result


Gene Information
Gene Name PIGU
Gene ID 128869
Gene Full Name phosphatidylinositol glycan anchor biosynthesis class U
Gene Alias GAB1; CDC91L1
Transcripts ENSG00000101464
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Gene Function Oncogene
Uniport_ID Q9H490
HGNC ID HGNC:15791
VEGA ID OTTHUMG00000032304
OMIM ID 608528
String ID 9606.ENSP00000217446
PharmGKB ID PA162399506
Target gene [PIGU] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1011781 chr20 8 8 View
1012822 chr20 6 6 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PIGU expression and immune infiltrating cell level correlation result in HBV+ samples
PIGU expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).