HIV Target gene Detail Information

> PIGN Gene Search Result

Gene Information

Gene Name	PIGN
Gene ID	23556
Gene Full Name	phosphatidylinositol glycan anchor biosynthesis class N
Gene Alias	MCD4; MDC4; MCAHS; PIG-N; MCAHS1
Transcripts	ENSG00000197563
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Plasma membrane;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	O95427
HGNC ID	HGNC:8967
VEGA ID	OTTHUMG00000180098
OMIM ID	606097
String ID	9606.ENSP00000350263
PharmGKB ID	PA33298

Target gene [PIGN] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4004508	chr18	7	36		43	View
4016504	chr18				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of PIGN expression and immune infiltrating cell level correlation result in HIV+ samples
PIGN expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of PIGN expression and immune infiltrating cell level correlation result in HIV+ samples
PIGN expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).