HBV Target gene Detail Information

> PID1 Gene Search Result


Gene Information
Gene Name PID1
Gene ID 55022
Gene Full Name phosphotyrosine interaction domain containing 1
Gene Alias PCLI1; NYGGF4; P-CLI1; HMFN2073
Transcripts ENSG00000153823
Virus HBV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q7Z2X4
HGNC ID HGNC:26084
VEGA ID OTTHUMG00000133191
OMIM ID 612930
String ID 9606.ENSP00000375907
PharmGKB ID PA162399462
Target gene [PID1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001772 chr2 427 42 21 490 View
1400044 chr2 49 1 50 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PID1 expression and immune infiltrating cell level correlation result in HBV+ samples
PID1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).