HBV Target gene Detail Information

> PEX1 Gene Search Result


Gene Information
Gene Name PEX1
Gene ID 5189
Gene Full Name peroxisomal biogenesis factor 1
Gene Alias ZWS; ZWS1; HMLR1; PBD1A; PBD1B
Transcripts ENSG00000127980
Virus HBV
Gene Type protein coding
HPA Location Info Peroxisomes;
HPA Protein Class Info Disease related genes, Plasma proteins, Potential drug targets, Predicted intracellular proteins, Transporters
Uniport_ID O43933
HGNC ID HGNC:8850
VEGA ID OTTHUMG00000023926
OMIM ID 602136
String ID 9606.ENSP00000248633
PharmGKB ID PA33192
Target gene [PEX1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001044 chr7 1058 47 3 1108 View
1001045 chr7 1058 47 3 1108 View
1001046 chr7 1058 47 3 1108 View
1400162 chr7 21 4 3 28 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PEX1 expression and immune infiltrating cell level correlation result in HBV+ samples
PEX1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).