HBV Target gene Detail Information

> PDGFD Gene Search Result

Gene Information

Gene Name	PDGFD
Gene ID	80310
Gene Full Name	platelet derived growth factor D
Gene Alias	IEGF; SCDGFB; MSTP036; SCDGF-B
Transcripts	ENSG00000170962
Virus	HBV
Gene Type	protein coding
HPA Location Info	Golgi apparatus;Vesicles;Predicted to be secreted;
HPA Protein Class Info	Predicted intracellular proteins, Predicted secreted proteins, RAS pathway related proteins
Uniport_ID	Q9GZP0
HGNC ID	HGNC:30620
VEGA ID	OTTHUMG00000165953
OMIM ID	609673
String ID	9606.ENSP00000376865
Drugbank ID	BE0003411
PharmGKB ID	PA134892327

Target gene [PDGFD] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1006007	chr11		12	33	45	View
1400086	chr11				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of PDGFD expression and immune infiltrating cell level correlation result in HBV+ samples
PDGFD expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).