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HIV Target gene Detail Information

> PDE6G Gene Search Result


Gene Information
Gene Name PDE6G
Gene ID 5148
Gene Full Name phosphodiesterase 6G
Gene Alias PDEG; RP57
Transcripts ENSG00000185527
Virus HIV
Gene Type protein coding
HPA Location Info Vesicles;
HPA Protein Class Info Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins
Uniport_ID P18545
HGNC ID HGNC:8789
VEGA ID OTTHUMG00000178038
OMIM ID 180073
String ID 9606.ENSP00000328412
Drugbank ID BE0003556
PharmGKB ID PA33137
Target gene [PDE6G] related to VISs
DVIDChromosomeHMTFBSCASum of Overlapped RecordsDetail
4000372 chr17 161 181 165 507 View
4016252 chr17 0 View
Showing 1 to 2 of 2 entries
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Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of PDE6G expression and immune infiltrating cell level correlation result in HIV+ samples
PDE6G expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).