HBV Target gene Detail Information

> PDE3B Gene Search Result


Gene Information
Gene Name PDE3B
Gene ID 5140
Gene Full Name phosphodiesterase 3B
Gene Alias HcGIP1; cGIPDE1
Transcripts ENSG00000152270
Virus HBV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, FDA approved drug targets, Predicted membrane proteins
Uniport_ID Q13370
HGNC ID HGNC:8779
VEGA ID OTTHUMG00000165898
OMIM ID 602047
String ID 9606.ENSP00000282096
Drugbank ID BE0001223; BE0009789; BE0004922
PharmGKB ID PA33127
Target gene [PDE3B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002901 chr11 180 8 4 192 View
1008746 chr11 5 6 8 19 View
1013259 chr11 3 2 5 View
1013277 chr11 3 2 5 View
1013328 chr11 3 2 5 View
1013352 chr11 3 2 5 View
1013419 chr11 3 2 5 View
1013982 chr11 3 1 4 View
1016829 chr11 1 1 View
1017104 chr11 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PDE3B expression and immune infiltrating cell level correlation result in HBV+ samples
PDE3B expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).