HIV Target gene Detail Information

> PDCD11 Gene Search Result

Gene Information

Gene Name	PDCD11
Gene ID	22984
Gene Full Name	programmed cell death 11
Gene Alias	ALG4; NFBP; RRP5; ALG-4
Transcripts	ENSG00000148843
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoli rim;Vesicles;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q14690
HGNC ID	HGNC:13408
VEGA ID	OTTHUMG00000018988
OMIM ID	612333
String ID	9606.ENSP00000358812
PharmGKB ID	PA134909758

Target gene [PDCD11] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4008312	chr10	14	1		15	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of PDCD11 expression and immune infiltrating cell level correlation result in HIV+ samples
PDCD11 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).