HPV Target gene Detail Information

> PCLO Gene Search Result


Gene Information
Gene Name PCLO
Gene ID 27445
Gene Full Name piccolo presynaptic cytomatrix protein
Gene Alias ACZ; PCH3
Transcripts ENSG00000186472
Virus HPV
Gene Type protein coding
HPA Location Info Nuclear speckles;Plasma membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9Y6V0
HGNC ID HGNC:13406
VEGA ID OTTHUMG00000154853
OMIM ID 604918
String ID 9606.ENSP00000334319
PharmGKB ID PA33072
Target gene [PCLO] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5201143 chr7 5 4 9 View
5201242 chr7 1 1 View
5404188 chr7 2 2 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).