HIV Target gene Detail Information

> PCIF1 Gene Search Result

Gene Information

Gene Name	PCIF1
Gene ID	63935
Gene Full Name	PDX1 C-terminal inhibiting factor 1
Gene Alias	C20orf67; PPP1R121
Transcripts	ENSG00000100982
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytokinetic bridge;Microtubules;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q9H4Z3
HGNC ID	HGNC:16200
VEGA ID	OTTHUMG00000032635
OMIM ID	618626
String ID	9606.ENSP00000361486
PharmGKB ID	PA162398977

Target gene [PCIF1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4013953	chr20	1	2		3	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of PCIF1 expression and immune infiltrating cell level correlation result in HIV+ samples
PCIF1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).