HIV Target gene Detail Information

> PCED1B Gene Search Result

Gene Information

Gene Name	PCED1B
Gene ID	91523
Gene Full Name	PC-esterase domain containing 1B
Gene Alias	FAM113B
Transcripts	ENSG00000179715
Virus	HIV
Gene Type	protein coding
HPA Location Info	Golgi apparatus;Vesicles;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q96HM7
HGNC ID	HGNC:28255
VEGA ID	OTTHUMG00000169617
String ID	9606.ENSP00000446688
PharmGKB ID	PA143485471

Target gene [PCED1B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4006671	chr12	9	2	12	23	View
4007241	chr12	19	1		20	View
4010825	chr12	8			8	View
4013574	chr12	1	2		3	View
4015599	chr12	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of PCED1B expression and immune infiltrating cell level correlation result in HIV+ samples
PCED1B expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).