HBV Target gene Detail Information

> PCDHGB1 Gene Search Result

Gene Information

Gene Name	PCDHGB1
Gene ID	56104
Gene Full Name	protocadherin gamma subfamily B, 1
Gene Alias	PCDH-GAMMA-B1
Transcripts	ENSG00000254221
Virus	HBV
Gene Type	protein coding
HPA Location Info	Plasma membrane;Vesicles;Focal adhesion sites;Midbody;Nucleoplasm;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	Q9Y5G3
HGNC ID	HGNC:8708
VEGA ID	OTTHUMG00000163681
OMIM ID	606299
String ID	9606.ENSP00000429273
PharmGKB ID	PA33056

Target gene [PCDHGB1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1404520	chr5	97	477	333	907	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of PCDHGB1 expression and immune infiltrating cell level correlation result in HBV+ samples
PCDHGB1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).