HTLV1 Target gene Detail Information

> PCDH7 Gene Search Result


Gene Information
Gene Name PCDH7
Gene ID 5099
Gene Full Name protocadherin 7
Gene Alias BHPCDH; BH-Pcdh; PPP1R120
Transcripts ENSG00000169851
Virus HTLV1
Gene Type protein coding
HPA Location Info Cell Junctions;Plasma membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID O60245
HGNC ID HGNC:8659
VEGA ID OTTHUMG00000160364
OMIM ID 602988
String ID 9606.ENSP00000441802
PharmGKB ID PA33006
Target gene [PCDH7] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6013090 chr4 15 1 4 20 View
6013874 chr4 7 11 18 View
6017125 chr4 10 1 11 View
6024805 chr4 3 3 View
6024900 chr4 1 2 3 View
6030280 chr4 1 1 View
6030626 chr4 0 View
6031989 chr4 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).