HIV Target gene Detail Information

> PCDH17 Gene Search Result

Gene Information

Gene Name	PCDH17
Gene ID	27253
Gene Full Name	protocadherin 17
Gene Alias	PCH68; PCDH68
Transcripts	ENSG00000118946
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Plasma membrane;Vesicles;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Gene Function	Suppressor gene
Uniport_ID	O14917
HGNC ID	HGNC:14267
VEGA ID	OTTHUMG00000016992
OMIM ID	611760
String ID	9606.ENSP00000367151
PharmGKB ID	PA33001

Target gene [PCDH17] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4016210	chr13				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of PCDH17 expression and immune infiltrating cell level correlation result in HIV+ samples
PCDH17 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).