HIV Target gene Detail Information

> PCDH17 Gene Search Result


Gene Information
Gene Name PCDH17
Gene ID 27253
Gene Full Name protocadherin 17
Gene Alias PCH68; PCDH68
Transcripts ENSG00000118946
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Plasma membrane;Vesicles;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Gene Function Suppressor gene
Uniport_ID O14917
HGNC ID HGNC:14267
VEGA ID OTTHUMG00000016992
OMIM ID 611760
String ID 9606.ENSP00000367151
PharmGKB ID PA33001
Target gene [PCDH17] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4016210 chr13 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).