HTLV1 Target gene Detail Information

> PCDH15 Gene Search Result

Gene Information

Gene Name	PCDH15
Gene ID	65217
Gene Full Name	protocadherin related 15
Gene Alias	USH1F; CDHR15; DFNB23
Transcripts	ENSG00000150275
Virus	HTLV1
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q96QU1
HGNC ID	HGNC:14674
VEGA ID	OTTHUMG00000018259
OMIM ID	605514
String ID	9606.ENSP00000363068
PharmGKB ID	PA32999

Target gene [PCDH15] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6007151	chr10	26	10	23	59	View
6008058	chr10	47	2		49	View
6008790	chr10	7	21	14	42	View
6011937	chr10	19	5		24	View
6016606	chr10		12		12	View
6018022	chr10	8	2		10	View
6020160	chr10	1	1	5	7	View
6020708	chr10	3	3		6	View
6023979	chr10	3	1		4	View
6026250	chr10	2			2	View
6026642	chr10	1	1		2	View
6028015	chr10	1			1	View
6029381	chr10	1			1	View
6030160	chr10	1			1	View
6030202	chr10		1		1	View
6032063	chr10				0	View
6032307	chr10				0	View
6032308	chr10				0	View
6032309	chr10				0	View
6032310	chr10				0	View
6032564	chr10				0	View
6032955	chr10				0	View
6033033	chr10				0	View
6033436	chr10				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).