HBV Target gene Detail Information

> PCDH11X Gene Search Result


Gene Information
Gene Name PCDH11X
Gene ID 27328
Gene Full Name protocadherin 11 X-linked
Gene Alias PCDHX; PCDH-X; PCDH-Y; PCDH11; PCDH22; PCDH11Y; PPP1R119
Transcripts ENSG00000102290
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID Q9BZA7
HGNC ID HGNC:8656
VEGA ID OTTHUMG00000021965
OMIM ID 300246
String ID 9606.ENSP00000362186
PharmGKB ID PA32996
Target gene [PCDH11X] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006410 chrX 39 39 View
1010646 chrX 11 11 View
1018127 chrX 0 View
1018128 chrX 0 View
1018129 chrX 0 View
1018328 chrX 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PCDH11X expression and immune infiltrating cell level correlation result in HBV+ samples
PCDH11X expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).