HIV Target gene Detail Information

> PBRM1 Gene Search Result


Gene Information
Gene Name PBRM1
Gene ID 55193
Gene Full Name polybromo 1
Gene Alias PB1; BAF180
Transcripts ENSG00000163939
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Cancer-related genes, Disease related genes, Predicted intracellular proteins, Transcription factors
Gene Function Suppressor gene
Uniport_ID Q86U86
HGNC ID HGNC:30064
VEGA ID OTTHUMG00000152663
OMIM ID 606083
String ID 9606.ENSP00000378307
PharmGKB ID PA162398846
Target gene [PBRM1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4004980 chr3 33 4 37 View
4005862 chr3 28 1 29 View
4011093 chr3 5 2 7 View
4011919 chr3 1 5 6 View
4012311 chr3 5 5 View
4012312 chr3 5 5 View
4012313 chr3 5 5 View
4015374 chr3 1 1 View
4016516 chr3 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).