HBV Target gene Detail Information

> PATZ1 Gene Search Result


Gene Information
Gene Name PATZ1
Gene ID 23598
Gene Full Name POZ/BTB and AT hook containing zinc finger 1
Gene Alias ZSG; MAZR; PATZ; RIAZ; ZBTB19; ZNF278; dJ400N23
Transcripts ENSG00000100105
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Cancer-related genes, Disease related genes, Predicted intracellular proteins, Transcription factors
Gene Function Oncogene
Uniport_ID Q9HBE1
HGNC ID HGNC:13071
VEGA ID OTTHUMG00000151254
OMIM ID 605165
String ID 9606.ENSP00000266269
PharmGKB ID PA162398806
Target gene [PATZ1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1007186 chr22 22 7 29 View
1008480 chr22 14 6 20 View
1403570 chr22 22 7 29 View
1403571 chr22 14 6 20 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PATZ1 expression and immune infiltrating cell level correlation result in HBV+ samples
PATZ1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).