HIV Target gene Detail Information

> PATL2 Gene Search Result

Gene Information

Gene Name	PATL2
Gene ID	197135
Gene Full Name	PAT1 homolog 2
Gene Alias	OOMD4; Pat1a; hPat1a
Transcripts	ENSG00000282077
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins
Uniport_ID	C9JE40
HGNC ID	HGNC:33630
VEGA ID	OTTHUMG00000191131
OMIM ID	614661
String ID	9606.ENSP00000416673
PharmGKB ID	PA164724408

Target gene [PATL2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001559	chr15	5	74	72	151	View
4002320	chr15	22	42	36	100	View
4002642	chr15	4	35	47	86	View
4003372	chr15	9	18	36	63	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of PATL2 expression and immune infiltrating cell level correlation result in HIV+ samples
PATL2 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of PATL2 expression and immune infiltrating cell level correlation result in HIV+ samples
PATL2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).