HBV Target gene Detail Information

> PAPPA Gene Search Result


Gene Information
Gene Name PAPPA
Gene ID 5069
Gene Full Name pappalysin 1
Gene Alias PAPA; DIPLA1; PAPP-A; PAPPA1; ASBABP2; IGFBP-4ase
Transcripts ENSG00000182752
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Cancer-related genes, Candidate cardiovascular disease genes, Enzymes, Plasma proteins, Predicted secreted proteins
Uniport_ID Q13219
HGNC ID HGNC:8602
VEGA ID OTTHUMG00000021045
OMIM ID 176385
String ID 9606.ENSP00000330658
Drugbank ID BE0008956
PharmGKB ID PA32935
Target gene [PAPPA] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1007982 chr9 12 9 2 23 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of PAPPA expression and immune infiltrating cell level correlation result in HBV+ samples
PAPPA expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).