HTLV1 Target gene Detail Information

> PAMR1 Gene Search Result

Gene Information

Gene Name	PAMR1
Gene ID	25891
Gene Full Name	peptidase domain containing associated with muscle regeneration 1
Gene Alias	RAMP; FP938; DKFZP586H2123
Transcripts	ENSG00000149090
Virus	HTLV1
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Enzymes, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID	Q6UXH9
HGNC ID	HGNC:24554
VEGA ID	OTTHUMG00000166328
String ID	9606.ENSP00000482899
PharmGKB ID	PA164724339

Target gene [PAMR1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6014272	chr11	6	11		17	View
6015642	chr11	14			14	View
6030997	chr11				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of PAMR1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
PAMR1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).